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Ghazi A, VijayRaghavan KV. Developmental biology. Control by combinatorial codes. Nature. 2000 Nov 23;408(6811):419-20. doi: 10.1038/35044174. PubMed PMID: 11100709.
Ghazi A, Anant S, VijayRaghavan K. Apterous mediates development of direct flight muscles autonomously and indirect flight muscles through epidermal cues. Development. 2000 Dec;127(24):5309-18. doi: 10.1242/dev.127.24.5309. PubMed PMID: 11076753.
Ghazi A, VijayRaghavan K. Muscle Development in Drosophila. Proc. Indian Natn. Sci. Acad.. 2002 April; B69(5):691-702.
Ghazi A, Paul L, VijayRaghavan K. Prepattern genes and signaling molecules regulate stripe expression to specify Drosophila flight muscle attachment sites. Mech Dev. 2003 May;120(5):519-28. doi: 10.1016/s0925-4773(03)00042-x. PubMed PMID: 12782269.
Ghazi A, Henis-Korenblit S, Kenyon C. Regulation of Caenorhabditis elegans lifespan by a proteasomal E3 ligase complex. Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):5947-52. doi: 10.1073/pnas.0700638104. Epub 2007 Mar 28. PubMed PMID: 17392428; PubMed Central PMCID: PMC1851597.
Ghazi A, Henis-Korenblit S, Kenyon C. A transcription elongation factor that links signals from the reproductive system to lifespan extension in Caenorhabditis elegans. PLoS Genet. 2009 Sep;5(9):e1000639. doi: 10.1371/journal.pgen.1000639. Epub 2009 Sep 11. PubMed PMID: 19749979; PubMed Central PMCID: PMC2729384.
Ghazi A. Transcriptional networks that mediate signals from reproductive tissues to influence lifespan. Genesis. 2013 Jan;51(1):1-15. doi: 10.1002/dvg.22345. Epub 2012 Oct 22. Review. PubMed PMID: 22945891.
Keith SA, Amrit FR, Ratnappan R, Ghazi A. The C. elegans healthspan and stress-resistance assay toolkit. Methods. 2014 Aug 1;68(3):476-86. doi: 10.1016/j.ymeth.2014.04.003. Epub 2014 Apr 13. PubMed PMID: 24727065.
Ghazi A, Yanowitz J, Silverman GA. Expanding the C. elegans toolbox into a toolshed. Methods. 2014 Aug 1;68(3):379-80. doi: 10.1016/j.ymeth.2014.07.005. PubMed PMID: 25064639; PubMed Central PMCID: PMC5408735.
Amrit FR, Ratnappan R, Keith SA, Ghazi A. The C. elegans lifespan assay toolkit. Methods. 2014 Aug 1;68(3):465-75. doi: 10.1016/j.ymeth.2014.04.002. Epub 2014 Apr 13. PubMed PMID: 24727064.
Ratnappan R, Amrit FR, Chen SW, Gill H, Holden K, Ward J, Yamamoto KR, Olsen CP, Ghazi A. Germline signals deploy NHR-49 to modulate fatty-acid β-oxidation and desaturation in somatic tissues of C. elegans. PLoS Genet. 2014 Dec;10(12):e1004829. doi: 10.1371/journal.pgen.1004829. eCollection 2014 Dec. PubMed PMID: 25474470; PubMed Central PMCID: PMC4256272.
Keith SA, Ghazi A. Recent Discoveries in the Reproductive Control of Aging. Current Medical Genetic Reports. 2014 December. doi: 10.1007/s40142-014-0060-8.
Ghazi A, Lamitina T. Stress signaling: serotonin spreads systemic stress. Curr Biol. 2015 Jan 19;25(2):R71-R73. doi: 10.1016/j.cub.2014.11.055. PubMed PMID: 25602307.
Keith SA, Maddux SK, Zhong Y, Chinchankar MN, Ferguson AA, Ghazi A, Fisher AL. Graded Proteasome Dysfunction in Caenorhabditis elegans Activates an Adaptive Response Involving the Conserved SKN-1 and ELT-2 Transcription Factors and the Autophagy-Lysosome Pathway. PLoS Genet. 2016 Feb;12(2):e1005823. doi: 10.1371/journal.pgen.1005823. eCollection 2016 Feb. PubMed PMID: 26828939; PubMed Central PMCID: PMC4734690.
Amrit FR, Steenkiste EM, Ratnappan R, Chen SW, McClendon TB, Kostka D, Yanowitz J, Olsen CP, Ghazi A. DAF-16 and TCER-1 Facilitate Adaptation to Germline Loss by Restoring Lipid Homeostasis and Repressing Reproductive Physiology in C. elegans. PLoS Genet. 2016 Feb;12(2):e1005788. doi: 10.1371/journal.pgen.1005788. eCollection 2016 Feb. PubMed PMID: 26862916; PubMed Central PMCID: PMC4749232.
Ratnappan R, Ward JD, Yamamoto KR, Ghazi A. Nuclear hormone receptors as mediators of metabolic adaptability following reproductive perturbations. Worm. 2016 Jan-Mar;5(1):e1151609. doi: 10.1080/21624054.2016.1151609. eCollection 2016 Jan-Mar. PubMed PMID: 27073739; PubMed Central PMCID: PMC4805359.
Amrit FR, Steenkiste EM, Ratnappan R, Chen SW, McClendon TB, Kostka D, Yanowitz J, Olsen CP, Ghazi A. Correction: DAF-16 and TCER-1 Facilitate Adaptation to Germline Loss by Restoring Lipid Homeostasis and Repressing Reproductive Physiology in C. elegans. PLoS Genet. 2016 Oct;12(10):e1006381. doi: 10.1371/journal.pgen.1006381. eCollection 2016 Oct. PubMed PMID: 27716821; PubMed Central PMCID: PMC5065129.
McClendon TB, Mainpal R, Amrit FR, Krause MW, Ghazi A, Yanowitz JL. X Chromosome Crossover Formation and Genome Stability in Caenorhabditis elegans Are Independently Regulated by xnd-1. G3 (Bethesda). 2016 Dec 7;6(12):3913-3925. doi: 10.1534/g3.116.035725. PubMed PMID: 27678523; PubMed Central PMCID: PMC5144962.
Amrit F, Ghazi A. Influences of Germline Cells on Organismal Lifespan and Healthspan. C. elegans and its contribution to our understanding of aging and longevity.. In: Gill MS, Olsen A, editors. C. elegans and its contribution to our understanding of aging and longevity [Internet] 1 ed. Switzerland: Springer; 2017. Chapter 6; p.109-135. 1469p. Available from: https://link.springer.com/chapter/10.1007/978-3-319-44703-2_6#citeas..
King CD, Singh D, Holden K, Govan AB, Keith S, Ghazi A, Robinson RA. Dataset of proteomics analysis of aging C. elegans exposed to Pseudomonas aeruginosa strain PA01. Data Brief. 2017 Apr;11:245-251. doi: 10.1016/j.dib.2017.02.001. eCollection 2017 Apr. PubMed PMID: 28243620; PubMed Central PMCID: PMC5320047.
Amrit FRG, Ghazi A. Transcriptomic Analysis of C. elegans RNA Sequencing Data Through the Tuxedo Suite on the Galaxy Project. J Vis Exp. 2017 Apr 8;(122). doi: 10.3791/55473. PubMed PMID: 28448031; PubMed Central PMCID: PMC5564484.
King CD, Singh D, Holden K, Govan AB, Keith SA, Ghazi A, Robinson RAS. Proteomic identification of virulence-related factors in young and aging C. elegans infected with Pseudomonas aeruginosa. J Proteomics. 2018 Jun 15;181:92-103. doi: 10.1016/j.jprot.2018.04.006. Epub 2018 Apr 12. PubMed PMID: 29656019.
Amrit FRG, Naim N, Ratnappan R, Loose J, Mason C, Steenberge L, McClendon BT, Wang G, Driscoll M, Yanowitz JL, Ghazi A. The longevity-promoting factor, TCER-1, widely represses stress resistance and innate immunity. Nat Commun. 2019 Jul 17;10(1):3042. doi: 10.1038/s41467-019-10759-z. PubMed PMID: 31316054; PubMed Central PMCID: PMC6637209.
Schiffer JA, Servello FA, Heath WR, Amrit FRG, Stumbur SV, Eder M, Martin OM, Johnsen SB, Stanley JA, Tam H, Brennan SJ, McGowan NG, Vogelaar AL, Xu Y, Serkin WT, Ghazi A, Stroustrup N, Apfeld J. Caenorhabditis elegans processes sensory information to choose between freeloading and self-defense strategies. Elife. 2020 May 5;9. doi: 10.7554/eLife.56186. PubMed PMID: 32367802; PubMed Central PMCID: PMC7213980.
Naim N, Amrit FRG, McClendon TB, Yanowitz JL, Ghazi A. The molecular tug of war between immunity and fertility: Emergence of conserved signaling pathways and regulatory mechanisms. Bioessays. 2020 Dec;42(12):e2000103. doi: 10.1002/bies.202000103. Epub 2020 Nov 9. Review. PubMed PMID: 33169418; PubMed Central PMCID: PMC8219210.
Quesada-Candela C, Loose J, Ghazi A, Yanowitz JL. Molecular basis of reproductive senescence: insights from model organisms. J Assist Reprod Genet. 2021 Jan;38(1):17-32. doi: 10.1007/s10815-020-01959-4. Epub 2020 Oct 1. Review. PubMed PMID: 33006069; PubMed Central PMCID: PMC7822982.
Wani KA, Goswamy D, Taubert S, Ratnappan R, Ghazi A, Irazoqui JE. NHR-49/PPAR-α and HLH-30/TFEB cooperate for C. elegans host defense via a flavin-containing monooxygenase. Elife. 2021 May 12;10. doi: 10.7554/eLife.62775. PubMed PMID: 33978570; PubMed Central PMCID: PMC8139828.
Loose JA, Ghazi A. Auxin treatment increases lifespan in Caenorhabditis elegans. Biol Open. 2021 May 15;10(5). doi: 10.1242/bio.058703. Epub 2021 May 7. PubMed PMID: 34184729; PubMed Central PMCID: PMC8186727.
Naim N, Amrit FRG, Ratnappan R, DelBuono N, Loose JA, Ghazi A. Cell nonautonomous roles of NHR-49 in promoting longevity and innate immunity. Aging Cell. 2021 Jul;20(7):e13413. doi: 10.1111/acel.13413. Epub 2021 Jun 22. PubMed PMID: 34156142; PubMed Central PMCID: PMC8282243.
Doering KRS, Cheng X, Milburn L, Ratnappan R, Ghazi A, Miller DL, Taubert S. Nuclear hormone receptor NHR-49 acts in parallel with HIF-1 to promote hypoxia adaptation in Caenorhabditis elegans. Elife. 2022 Mar 14;11. doi: 10.7554/eLife.67911. PubMed PMID: 35285794; PubMed Central PMCID: PMC8959602.
Jofré DM, Hoffman DK, Cervino AS, Hahn GM, Grundy M, Yun S, Amrit FRG, Stolz DB, Godoy LF, Salvatore E, Rossi FA, Ghazi A, Cirio MC, Yanowitz JL, Hochbaum D. The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans. Proc Natl Acad Sci U S A. 2022 Apr 12;119(15):e2109508119. doi: 10.1073/pnas.2109508119. Epub 2022 Apr 8. PubMed PMID: 35394881; PubMed Central PMCID: PMC9169646.
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