A Python module for image normalization of H&E stained histology slides.
- sklearn
- numpy
- imageio
import imageio
from h_and_e_normalization import colorassign_manual
loaded_image = imageio.imread('/path/to/image.tif')
result = colorassign_manual(loaded_image)python -m h_and_e_normalization.colorassign_manual -i '/path/to/image.tif' -o '/path/to/output.json'